16S rRNA Amplicon Sequencing for Epidemiological Surveys of Bacteria in Wildlife

The human impact on natural habitats is increasing the complexity of human-wildlife interactions and leading to the emergence of infectious diseases worldwide. Highly successful synanthropic wildlife species, such as rodents, will undoubtedly play an increasingly important role in transmitting zoonotic diseases. We investigated the potential for recent developments in 16S rRNA amplicon sequenci...

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S rRNA amplicon sequencing for epidemiological 1 ! surveys of bacteria in wildlife : the importance of cleaning 2 ! post - sequencing

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16 S rRNA amplicon sequencing for epidemiological 1 ! surveys of bacteria in wildlife : the importance of cleaning 2 ! post - sequencing data before estimating positivity

Maxime Galan, Maria Razzauti, Emilie Bard, Maria Bernard, Carine Brouat, 5! Nathalie Charbonnel, Alexandre Dehne-Garcia, Anne Loiseau, Caroline Tatard, 6! Lucie Tamisier, Muriel Vayssier-Taussat, Hélène Vignes, Jean-François Cosson 7! 1: INRA, CBGP, Montferrier sur Lez, France 8! 2: INRA, EpiA, Clermont-Ferrand, France 9! 3: INRA, Sigenae, France 10! 4 : INRA, GABI, AgroParisTech, Université Pa...

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S rRNA amplicon sequencing for epidemiological 1 ! surveys of bacteria in wildlife : the importance of cleaning 2 ! post - sequencing data before estimating positivity , 3 ! prevalence and co - infection

Maxime Galan, Maria Razzauti, Emilie Bard, Maria Bernard, Carine Brouat, 5! Nathalie Charbonnel, Alexandre Dehne-Garcia, Anne Loiseau, Caroline Tatard, 6! Lucie Tamisier, Muriel Vayssier-Taussat, Hélène Vignes, Jean-François Cosson 7! 1: INRA, CBGP, Montferrier sur Lez, France 8! 2: INRA, EpiA, Clermont-Ferrand, France 9! 3: INRA, Sigenae, France 10! 4 : INRA, GABI, AgroParisTech, Université Pa...

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16S rRNA Amplicon Sequencing for Epidemiological Surveys of Bacteria in Wildlife

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